X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fapplication%2Fgoac.java;h=7fbb22efff502c7ec9e984ac68a1f1ac23b55215;hb=60ff1de7026c288116202162d99b77ad7a6ba4ba;hp=1a6e00fd8668f380b7cd035719f583504c22c516;hpb=493e40b0c936b65da342134da37e8b856b9b80af;p=jalview.git

diff --git a/forester/java/src/org/forester/application/goac.java b/forester/java/src/org/forester/application/goac.java
index 1a6e00f..7fbb22e 100644
--- a/forester/java/src/org/forester/application/goac.java
+++ b/forester/java/src/org/forester/application/goac.java
@@ -5,7 +5,7 @@
 // Copyright (C) 2009 Christian M. Zmasek
 // Copyright (C) 2009 Burnham Institute for Medical Research
 // All rights reserved
-// 
+//
 // This library is free software; you can redistribute it and/or
 // modify it under the terms of the GNU Lesser General Public
 // License as published by the Free Software Foundation; either
@@ -15,13 +15,13 @@
 // but WITHOUT ANY WARRANTY; without even the implied warranty of
 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 // Lesser General Public License for more details.
-// 
+//
 // You should have received a copy of the GNU Lesser General Public
 // License along with this library; if not, write to the Free Software
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.application;
 
@@ -174,7 +174,7 @@ public class goac {
                 final int counts = counts_id.get( id );
                 double percentage = 0.0;
                 if ( sum > 0 ) {
-                    percentage = 100.0 * counts / ( sum );
+                    percentage = ( 100.0 * counts ) / ( sum );
                 }
                 System.out.println( counts + "\t" + counts + "/" + sum + "\t" + percentage + "\t" + id + "\t"
                         + goid_to_term_map.get( id ).getName() );
@@ -200,8 +200,8 @@ public class goac {
         System.out.println( "Usage:" );
         System.out.println();
         System.out
-                .println( PRG_NAME
-                        + " <file with all GO terms, in 'obo' format> <file with ancestral term ids> <file with go ids to be analyzed>" );
+        .println( PRG_NAME
+                  + " <file with all GO terms, in 'obo' format> <file with ancestral term ids> <file with go ids to be analyzed>" );
         System.out.println();
         System.out.println();
     }