X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fapplication%2Fpfam2go_extractor.java;h=d9f4cd3c89c35929a5fb1bfacecf7fb43f103ac9;hb=45fd3abd02ae6199f10d9a1c1f45d7d28c236475;hp=63b4320e5957daeec5c37a7c7929169dfdb4a100;hpb=73c5b11c1a00e539afb246e345ebf3f042dded78;p=jalview.git

diff --git a/forester/java/src/org/forester/application/pfam2go_extractor.java b/forester/java/src/org/forester/application/pfam2go_extractor.java
index 63b4320..d9f4cd3 100644
--- a/forester/java/src/org/forester/application/pfam2go_extractor.java
+++ b/forester/java/src/org/forester/application/pfam2go_extractor.java
@@ -21,7 +21,7 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.application;
 
@@ -83,8 +83,8 @@ public class pfam2go_extractor {
             final GoId go_id = pfam_to_go_mapping.getValue();
             final Set<GoId> supers = GoUtils.getAllSuperGoIds( go_id, goid_to_term_map );
             supers.add( go_id );
-            for( int i = 0; i < queries.length; ++i ) {
-                if ( supers.contains( queries[ i ] ) ) {
+            for( final GoId querie : queries ) {
+                if ( supers.contains( querie ) ) {
                     pfams.add( domain_id.toString() );
                 }
             }