X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Farchaeopteryx%2FTreePanelUtil.java;h=5d7d2fa2d5b7f5d8e1f1e5ec1b704ad4d595c361;hb=3ce13fed094f2f10da69eb4f22ee6136af51c133;hp=e1312145d7d0c9521348e59c7ca45d3b2342fe3e;hpb=187777133416c347dd7da371d7edf7ce20ebe56b;p=jalview.git diff --git a/forester/java/src/org/forester/archaeopteryx/TreePanelUtil.java b/forester/java/src/org/forester/archaeopteryx/TreePanelUtil.java index e131214..5d7d2fa 100644 --- a/forester/java/src/org/forester/archaeopteryx/TreePanelUtil.java +++ b/forester/java/src/org/forester/archaeopteryx/TreePanelUtil.java @@ -120,7 +120,7 @@ public class TreePanelUtil { * all external nodes of node. * If at least one the external nodes has no taxonomy, * null is returned. - * + * */ public static Set obtainDistinctTaxonomies( final PhylogenyNode node ) { final List descs = node.getAllExternalDescendants(); @@ -296,7 +296,7 @@ public class TreePanelUtil { if ( n.getNodeData().isHasTaxonomy() && ( !ForesterUtil.isEmpty( n.getNodeData().getTaxonomy().getScientificName() ) || !ForesterUtil.isEmpty( n.getNodeData().getTaxonomy().getCommonName() ) || !ForesterUtil - .isEmpty( n.getNodeData().getTaxonomy().getTaxonomyCode() ) ) ) { + .isEmpty( n.getNodeData().getTaxonomy().getTaxonomyCode() ) ) ) { if ( !ForesterUtil.isEmpty( n.getNodeData().getTaxonomy().getRank() ) && n.getNodeData().getTaxonomy().getRank().equalsIgnoreCase( rank ) ) { final BranchColor c = new BranchColor( tree_panel.calculateTaxonomyBasedColor( n.getNodeData() @@ -397,7 +397,7 @@ public class TreePanelUtil { if ( sb.charAt( sb.length() - 1 ) == ' ' ) { sb.deleteCharAt( sb.length() - 1 ); } - if ( i < ans.size() - 1 ) { + if ( i < ( ans.size() - 1 ) ) { sb.append( ", " ); } }