X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fgo%2FBasicGoRelationship.java;h=247e859bdfa6fa17fcadbed5cb0151a94168626c;hb=c6b74aa20ac0c91099597b9474e7da6c0ffdb9a6;hp=69d612ff4c34b6ce9faf25afa376b1cea9b9b7a9;hpb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;p=jalview.git

diff --git a/forester/java/src/org/forester/go/BasicGoRelationship.java b/forester/java/src/org/forester/go/BasicGoRelationship.java
index 69d612f..247e859 100644
--- a/forester/java/src/org/forester/go/BasicGoRelationship.java
+++ b/forester/java/src/org/forester/go/BasicGoRelationship.java
@@ -49,6 +49,9 @@ public class BasicGoRelationship implements GoRelationship {
         else if ( type.toLowerCase().equals( POSITIVELY_REGULATES_STR ) ) {
             _type = Type.POSITIVELY_REGULATES;
         }
+        else if ( type.toLowerCase().equals( HAS_PART_STR ) ) {
+            _type = Type.HAS_PART;
+        }
         else {
             throw new IllegalArgumentException( "unknown GO relationship type: " + type );
         }
@@ -124,8 +127,11 @@ public class BasicGoRelationship implements GoRelationship {
             case REGULATES:
                 sb.append( REGULATES_STR );
                 break;
+            case HAS_PART:
+                sb.append( HAS_PART_STR );
+                break;
             default:
-                new AssertionError( "unknown type: " + getType() );
+                new IllegalStateException( "unknown type: " + getType() );
         }
         sb.append( ": " );
         sb.append( getGoId().toString() );