X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fgo%2FGoSubset.java;h=2b7d2b541a2811734cd088a1ca230638c2bfa25c;hb=663daba455e534e015bd56bae070e9248e3a4533;hp=64773d0055218897fccebee902d46c9f992945ec;hpb=b568d2173eb55795647a68afc370aba0cb1170f2;p=jalview.git diff --git a/forester/java/src/org/forester/go/GoSubset.java b/forester/java/src/org/forester/go/GoSubset.java index 64773d0..2b7d2b5 100644 --- a/forester/java/src/org/forester/go/GoSubset.java +++ b/forester/java/src/org/forester/go/GoSubset.java @@ -21,22 +21,21 @@ // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA // // Contact: phylosoft @ gmail . com -// WWW: www.phylosoft.org/forester +// WWW: https://sites.google.com/site/cmzmasek/home/software/forester package org.forester.go; public interface GoSubset extends Comparable { - public static final String GOSLIM_GENERIC_STR = "goslim_generic"; - public static final String GOSLIM_GOA_STR = "goslim_goa"; - public static final String GOSLIM_PIR_STR = "goslim_pir"; - public static final String GOSUBSET_PROK_STR = "gosubset_prok"; - public static final String GOSLIM_CANDIDA_STR = "goslim_candida"; - public static final String GOSLIM_PLANT_STR = "goslim_plant"; - public static final String GOSLIM_YEAST_STR = "goslim_yeast"; - public static final String GOSLIM_POMBE_STR = "goslim_pombe"; - public static final String HIGH_LEVEL_ANNOTATION_QC_STR = "high_level_annotation_qc"; - public static final String UNVETTED_STR = "unvetted"; + public static final String GOSLIM_GENERIC_STR = "goslim_generic"; + public static final String GOSLIM_GOA_STR = "goslim_goa"; + public static final String GOSLIM_PIR_STR = "goslim_pir"; + public static final String GOSUBSET_PROK_STR = "gosubset_prok"; + public static final String GOSLIM_CANDIDA_STR = "goslim_candida"; + public static final String GOSLIM_ASPERGILLUS_STR = "goslim_aspergillus"; + public static final String GOSLIM_PLANT_STR = "goslim_plant"; + public static final String GOSLIM_YEAST_STR = "goslim_yeast"; + public static final String GOSLIM_POMBE_STR = "goslim_pombe"; public Type getType(); @@ -46,10 +45,10 @@ public interface GoSubset extends Comparable { GOSLIM_PIR, GOSUBSET_PROK, GOSLIM_CANDIDA, + GOSLIM_ASPERGILLUS, GOSLIM_PLANT, GOSLIM_YEAST, GOSLIM_POMBE, - HIGH_LEVEL_ANNOTATION_QC, - UNVETTED; + OTHER; } }