X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fio%2Fparsers%2Ftol%2FTolParser.java;h=24aeeba27882fcc048eab1df96311d99dc5aca52;hb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;hp=89688854bdc72c2171d82606c503361f31ddba40;hpb=b238db9423661e6271b54b2e50e56ecdd801a45b;p=jalview.git diff --git a/forester/java/src/org/forester/io/parsers/tol/TolParser.java b/forester/java/src/org/forester/io/parsers/tol/TolParser.java index 8968885..24aeeba 100644 --- a/forester/java/src/org/forester/io/parsers/tol/TolParser.java +++ b/forester/java/src/org/forester/io/parsers/tol/TolParser.java @@ -5,7 +5,7 @@ // Copyright (C) 2008-2009 Christian M. Zmasek // Copyright (C) 2008-2009 Burnham Institute for Medical Research // All rights reserved -// +// // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either @@ -15,7 +15,7 @@ // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. -// +// // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA @@ -127,6 +127,7 @@ public class TolParser implements PhylogenyParser { return _zipped_inputstream; } + @Override public Phylogeny[] parse() throws IOException, PhylogenyParserException { reset(); final TolXmlHandler handler = new TolXmlHandler(); @@ -246,6 +247,7 @@ public class TolParser implements PhylogenyParser { _warning_messages = new StringBuffer(); } + @Override public void setSource( final Object source ) { _source = source; }