X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fio%2Fwriters%2FPhylogenyWriter.java;h=911ebb5d8437f54cf9ed3fc21018deb1bd5e8519;hb=665e671efec73fcb36a9aac45f119330f290fa81;hp=6d3c836d311ee43d552590ce7012618af030de3b;hpb=b0fd64a5d558885627ba7a7295d9ef612fe76cd0;p=jalview.git diff --git a/forester/java/src/org/forester/io/writers/PhylogenyWriter.java b/forester/java/src/org/forester/io/writers/PhylogenyWriter.java index 6d3c836..911ebb5 100644 --- a/forester/java/src/org/forester/io/writers/PhylogenyWriter.java +++ b/forester/java/src/org/forester/io/writers/PhylogenyWriter.java @@ -49,7 +49,6 @@ import org.forester.util.ForesterUtil; public final class PhylogenyWriter { - private static final String UTF_8 = "UTF-8"; public final static boolean INDENT_PHYLOXML_DEAFULT = true; public final static String PHYLO_XML_INTENDATION_BASE = " "; public final static String PHYLO_XML_VERSION_ENCODING_LINE = ""; @@ -399,7 +398,7 @@ public final class PhylogenyWriter { public void toNexus( final File out_file, final Phylogeny tree, final NH_CONVERSION_SUPPORT_VALUE_STYLE svs ) throws IOException { - final Writer writer = new BufferedWriter( new PrintWriter( out_file, UTF_8 ) ); + final Writer writer = new BufferedWriter( new PrintWriter( out_file, ForesterConstants.UTF_8 ) ); final List trees = new ArrayList( 1 ); trees.add( tree ); writeNexusStart( writer ); @@ -426,14 +425,14 @@ public final class PhylogenyWriter { final List trees, final int phyloxml_level, final String separator ) throws IOException { - final Writer writer = new BufferedWriter( new PrintWriter( out_file, UTF_8 ) ); + final Writer writer = new BufferedWriter( new PrintWriter( out_file, ForesterConstants.UTF_8 ) ); toPhyloXML( writer, trees, phyloxml_level, separator ); writer.flush(); writer.close(); } public void toPhyloXML( final File out_file, final Phylogeny tree, final int phyloxml_level ) throws IOException { - final Writer writer = new BufferedWriter( new PrintWriter( out_file, UTF_8 ) ); + final Writer writer = new BufferedWriter( new PrintWriter( out_file, ForesterConstants.UTF_8 ) ); writePhyloXmlStart( writer ); toPhyloXMLNoPhyloXmlSource( writer, tree, phyloxml_level ); writePhyloXmlEnd( writer ); @@ -633,7 +632,7 @@ public final class PhylogenyWriter { if ( out_file.exists() ) { throw new IOException( "attempt to overwrite existing file \"" + out_file.getAbsolutePath() + "\"" ); } - final PrintWriter out = new PrintWriter( out_file, UTF_8 ); + final PrintWriter out = new PrintWriter( out_file, ForesterConstants.UTF_8 ); out.print( sb ); out.flush(); out.close();