X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fmsa%2FBasicMsa.java;h=d806c9011be0ecc70d9bf22f8d160ab2d259077d;hb=ec92d4a41f79253e26f5882fb1fca3238406ddf6;hp=fa6e321209e33046f56c07a8945f0c2693752677;hpb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;p=jalview.git

diff --git a/forester/java/src/org/forester/msa/BasicMsa.java b/forester/java/src/org/forester/msa/BasicMsa.java
index fa6e321..d806c90 100644
--- a/forester/java/src/org/forester/msa/BasicMsa.java
+++ b/forester/java/src/org/forester/msa/BasicMsa.java
@@ -27,6 +27,7 @@ package org.forester.msa;
 
 import java.io.IOException;
 import java.io.Writer;
+import java.util.ArrayList;
 import java.util.List;
 
 import org.forester.sequence.Sequence;
@@ -156,4 +157,13 @@ public class BasicMsa implements Msa {
         }
         return msa;
     }
+
+    @Override
+    public List<Character> getColumnAt( final int col ) {
+        final List<Character> column = new ArrayList<Character>();
+        for( int row = 0; row < getNumberOfSequences(); ++row ) {
+            column.add( getResidueAt( row, col ) );
+        }
+        return column;
+    }
 }