X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fmsa%2FClustalOmega.java;h=417e889867bf4645ce6b2c9fc0739513028cfb94;hb=5ea47511ea9c077b4b4709bed68ac31d6eee0477;hp=f6d4f6516c923d3eeb0b1be5c3bf627d76fd19a1;hpb=def5f3c9ca461176f1188d0adfd744726a56e6ed;p=jalview.git

diff --git a/forester/java/src/org/forester/msa/ClustalOmega.java b/forester/java/src/org/forester/msa/ClustalOmega.java
index f6d4f65..417e889 100644
--- a/forester/java/src/org/forester/msa/ClustalOmega.java
+++ b/forester/java/src/org/forester/msa/ClustalOmega.java
@@ -21,7 +21,7 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.msa;
 
@@ -71,7 +71,7 @@ public final class ClustalOmega extends MsaInferrer {
         return _exit_code;
     }
 
-    
+    @Override
     public Msa infer( final List<Sequence> seqs, final List<String> opts ) throws IOException, InterruptedException {
         final File file = File.createTempFile( "__clustalo_input_", ".fasta" );
         file.deleteOnExit();
@@ -82,8 +82,7 @@ public final class ClustalOmega extends MsaInferrer {
         file.delete();
         return msa;
     }
-    
-    
+
     @Override
     public Msa infer( final File path_to_input_seqs, final List<String> opts ) throws IOException, InterruptedException {
         init();
@@ -114,6 +113,4 @@ public final class ClustalOmega extends MsaInferrer {
         _error = null;
         _exit_code = -100;
     }
-
-  
 }