X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fphylogeny%2FPhylogenyMethods.java;h=c3fbc95cb6b32731f0ee22c3525775f5cf7a21a9;hb=3b40e07c1b3964dee89b5d24209946ac54a5e21f;hp=3616a890042437af85ac456408debba86ee4abac;hpb=2a7e162f5bdc0ff5cdb69581c472be319e9e2570;p=jalview.git diff --git a/forester/java/src/org/forester/phylogeny/PhylogenyMethods.java b/forester/java/src/org/forester/phylogeny/PhylogenyMethods.java index 3616a89..c3fbc95 100644 --- a/forester/java/src/org/forester/phylogeny/PhylogenyMethods.java +++ b/forester/java/src/org/forester/phylogeny/PhylogenyMethods.java @@ -107,7 +107,7 @@ public class PhylogenyMethods { return could_extract; } - public static DescriptiveStatistics calculatBranchLengthStatistics( final Phylogeny phy ) { + public static DescriptiveStatistics calculateBranchLengthStatistics( final Phylogeny phy ) { final DescriptiveStatistics stats = new BasicDescriptiveStatistics(); for( final PhylogenyNodeIterator iter = phy.iteratorPreorder(); iter.hasNext(); ) { final PhylogenyNode n = iter.next(); @@ -118,7 +118,7 @@ public class PhylogenyMethods { return stats; } - public static List calculatConfidenceStatistics( final Phylogeny phy ) { + public static List calculateConfidenceStatistics( final Phylogeny phy ) { final List stats = new ArrayList(); for( final PhylogenyNodeIterator iter = phy.iteratorPreorder(); iter.hasNext(); ) { final PhylogenyNode n = iter.next(); @@ -305,7 +305,7 @@ public class PhylogenyMethods { return x; } - public static DescriptiveStatistics calculatNumberOfDescendantsPerNodeStatistics( final Phylogeny phy ) { + public static DescriptiveStatistics calculateNumberOfDescendantsPerNodeStatistics( final Phylogeny phy ) { final DescriptiveStatistics stats = new BasicDescriptiveStatistics(); for( final PhylogenyNodeIterator iter = phy.iteratorPreorder(); iter.hasNext(); ) { final PhylogenyNode n = iter.next();