X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fsurfacing%2FAdjactantDirectedBinaryDomainCombination.java;h=1bcbc6073fc3c416a63f8fe5cdf2dfeebb83928d;hb=d4d61f9d2969283e821f650d031c169899fb3870;hp=bb3a8a9c6389768b4bb3f399405dd5fb7c3be6ce;hpb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;p=jalview.git

diff --git a/forester/java/src/org/forester/surfacing/AdjactantDirectedBinaryDomainCombination.java b/forester/java/src/org/forester/surfacing/AdjactantDirectedBinaryDomainCombination.java
index bb3a8a9..1bcbc60 100644
--- a/forester/java/src/org/forester/surfacing/AdjactantDirectedBinaryDomainCombination.java
+++ b/forester/java/src/org/forester/surfacing/AdjactantDirectedBinaryDomainCombination.java
@@ -22,23 +22,21 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.surfacing;
 
+import org.forester.protein.BinaryDomainCombination;
+
 public class AdjactantDirectedBinaryDomainCombination extends BasicBinaryDomainCombination {
 
-    public AdjactantDirectedBinaryDomainCombination( final DomainId n_terminal, final DomainId c_terminal ) {
+    public AdjactantDirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
         super();
         if ( ( n_terminal == null ) || ( c_terminal == null ) ) {
             throw new IllegalArgumentException( "attempt to create binary domain combination using null" );
         }
-        _id_0 = n_terminal;
-        _id_1 = c_terminal;
-    }
-
-    public AdjactantDirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
-        this( new DomainId( n_terminal ), new DomainId( c_terminal ) );
+        _id0 = n_terminal;
+        _id1 = c_terminal;
     }
 
     public static AdjactantDirectedBinaryDomainCombination createInstance( final String ids ) {