X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fsurfacing%2FAdjactantDirectedCombinableDomains.java;h=eb4f9f1f6f286b62412feb5d2941f2847e31edb6;hb=4aaa7b9109d4a4d7ed9c2f6cbba7c960a81a9ed0;hp=20d88d9938c5a02352f524490beae335ec28ba6f;hpb=73c5b11c1a00e539afb246e345ebf3f042dded78;p=jalview.git

diff --git a/forester/java/src/org/forester/surfacing/AdjactantDirectedCombinableDomains.java b/forester/java/src/org/forester/surfacing/AdjactantDirectedCombinableDomains.java
index 20d88d9..eb4f9f1 100644
--- a/forester/java/src/org/forester/surfacing/AdjactantDirectedCombinableDomains.java
+++ b/forester/java/src/org/forester/surfacing/AdjactantDirectedCombinableDomains.java
@@ -31,19 +31,18 @@ import java.util.ArrayList;
 import java.util.List;
 
 import org.forester.protein.BinaryDomainCombination;
-import org.forester.protein.DomainId;
 import org.forester.species.Species;
 
 public class AdjactantDirectedCombinableDomains extends BasicCombinableDomains {
 
-    public AdjactantDirectedCombinableDomains( final DomainId n_terminal_key_domain, final Species species ) {
+    public AdjactantDirectedCombinableDomains( final String n_terminal_key_domain, final Species species ) {
         super( n_terminal_key_domain, species );
     }
 
     @Override
     public List<BinaryDomainCombination> toBinaryDomainCombinations() {
         final List<BinaryDomainCombination> binary_combinations = new ArrayList<BinaryDomainCombination>( getNumberOfCombinableDomains() );
-        for( final DomainId domain : getCombiningDomains().keySet() ) {
+        for( final String domain : getCombiningDomains().keySet() ) {
             // Precondition (!): key domain is most upstream domain.
             //TODO ensure this is true.
             binary_combinations.add( new AdjactantDirectedBinaryDomainCombination( getKeyDomain(), domain ) );