X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fsurfacing%2FDirectedBinaryDomainCombination.java;h=4716be89550c24c1bb638a08527c0a715da5514e;hb=3171b9b28762e02b3fbd9b5f8a5b1946497f2178;hp=237bb67d87aa225711ab36809ff51449e6fccb77;hpb=73c5b11c1a00e539afb246e345ebf3f042dded78;p=jalview.git

diff --git a/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java b/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
index 237bb67..4716be8 100644
--- a/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
+++ b/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
@@ -22,26 +22,21 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.surfacing;
 
 import org.forester.protein.BinaryDomainCombination;
-import org.forester.protein.DomainId;
 
 public class DirectedBinaryDomainCombination extends BasicBinaryDomainCombination {
 
-    public DirectedBinaryDomainCombination( final DomainId n_terminal, final DomainId c_terminal ) {
+    public DirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
         super();
         if ( ( n_terminal == null ) || ( c_terminal == null ) ) {
             throw new IllegalArgumentException( "attempt to create binary domain combination using null" );
         }
-        _id_0 = n_terminal.getId();
-        _id_1 = c_terminal.getId();
-    }
-
-    public DirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
-        this( new DomainId( n_terminal ), new DomainId( c_terminal ) );
+        _id0 = n_terminal;
+        _id1 = c_terminal;
     }
 
     public static BinaryDomainCombination createInstance( final String ids ) {