X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fsurfacing%2FDirectedBinaryDomainCombination.java;h=dac4464896ba437dfaa3043653dcfef574c4be12;hb=92efbf3f36c205c03cdb7a542f0d2ab1ea7fdc2a;hp=e57e137d780e7ec8a7e9474d39240e99e5a5baa8;hpb=e14e8c06907c1bb35de6c3c21986e1e32e520d82;p=jalview.git

diff --git a/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java b/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
index e57e137..dac4464 100644
--- a/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
+++ b/forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
@@ -22,27 +22,22 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.surfacing;
 
 import org.forester.protein.BinaryDomainCombination;
-import org.forester.protein.DomainId;
 
 public class DirectedBinaryDomainCombination extends BasicBinaryDomainCombination {
 
-    public DirectedBinaryDomainCombination( final DomainId n_terminal, final DomainId c_terminal ) {
+    public DirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
         super();
         if ( ( n_terminal == null ) || ( c_terminal == null ) ) {
             throw new IllegalArgumentException( "attempt to create binary domain combination using null" );
         }
-        //_id_0 = n_terminal.getId();
-        //_id_1 = c_terminal.getId();
-        _data = n_terminal.getId() + BinaryDomainCombination.SEPARATOR + c_terminal.getId();
-    }
-
-    public DirectedBinaryDomainCombination( final String n_terminal, final String c_terminal ) {
-        this( new DomainId( n_terminal ), new DomainId( c_terminal ) );
+        //_id0 = n_terminal;
+        //_id1 = c_terminal;
+        _data = n_terminal + SEPARATOR + c_terminal;
     }
 
     public static BinaryDomainCombination createInstance( final String ids ) {