X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Fsurfacing%2FPairwiseGenomeComparator.java;h=4c3e442a73f43ad67bf2b18b6e2d654d9e1ad38c;hb=862ca59d36af9ccbed3ef284b497f9c04263ba97;hp=d9ad2aaae82c5e9e1f8a7a1b119ea6fd2a64782e;hpb=e367379ed038c8922bf7d898ba64d432c8ad3aec;p=jalview.git

diff --git a/forester/java/src/org/forester/surfacing/PairwiseGenomeComparator.java b/forester/java/src/org/forester/surfacing/PairwiseGenomeComparator.java
index d9ad2aa..4c3e442 100644
--- a/forester/java/src/org/forester/surfacing/PairwiseGenomeComparator.java
+++ b/forester/java/src/org/forester/surfacing/PairwiseGenomeComparator.java
@@ -43,6 +43,8 @@ import org.forester.evoinference.matrix.distance.DistanceMatrix;
 import org.forester.go.GoId;
 import org.forester.go.GoNameSpace;
 import org.forester.go.GoTerm;
+import org.forester.protein.DomainId;
+import org.forester.species.Species;
 import org.forester.surfacing.DomainSimilarityCalculator.Detailedness;
 import org.forester.util.DescriptiveStatistics;
 import org.forester.util.ForesterUtil;
@@ -214,6 +216,7 @@ public class PairwiseGenomeComparator {
                                                                                 new StringBuilder( species_i + "-"
                                                                                         + species_j ),
                                                                                 writer,
+                                                                                null,
                                                                                 similarities,
                                                                                 true,
                                                                                 null,