X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Ftools%2FConfidenceAssessor.java;h=18c93079fa23f06dc08f05361fbdd4c5efacc060;hb=d605114bdf420c6cb680b02bb10ea25f09db769c;hp=2dc710cdad95e1228e8cf0e0418c9abfaf02a769;hpb=656be28debec520e0e35a8b311114398a40ea366;p=jalview.git diff --git a/forester/java/src/org/forester/tools/ConfidenceAssessor.java b/forester/java/src/org/forester/tools/ConfidenceAssessor.java index 2dc710c..18c9307 100644 --- a/forester/java/src/org/forester/tools/ConfidenceAssessor.java +++ b/forester/java/src/org/forester/tools/ConfidenceAssessor.java @@ -90,7 +90,7 @@ public final class ConfidenceAssessor { for( final Confidence confidence : confidences ) { if ( confidence.getType().equals( confidence_type ) ) { throw new IllegalArgumentException( "confidence [" + confidence_type - + "] is already present in target" ); + + "] is already present in target" ); } } } @@ -128,9 +128,9 @@ public final class ConfidenceAssessor { if ( strict ) { if ( evaluator.getNumberOfExternalNodes() != target.getNumberOfExternalNodes() ) { throw new IllegalArgumentException( "evaluator #" + counter - + " does not have the same number of external nodes [" - + evaluator.getNumberOfExternalNodes() + "] than the corresponding target [" - + target.getNumberOfExternalNodes() + "]" ); + + " does not have the same number of external nodes [" + + evaluator.getNumberOfExternalNodes() + "] than the corresponding target [" + + target.getNumberOfExternalNodes() + "]" ); } } final TreeSplitMatrix s = new TreeSplitMatrix( evaluator, strict, target );