X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Futil%2FBasicDescriptiveStatistics.java;h=081895132feca8950bc2645cd4664345e323d448;hb=bc282cbd857f4fb9decdc00b278640bcf146a645;hp=8ec95e7edb3fd5d04335b15bd0222816ed21cd74;hpb=eee996a6476a1e3d84c07f8f690dcde3ff4b2ef5;p=jalview.git

diff --git a/forester/java/src/org/forester/util/BasicDescriptiveStatistics.java b/forester/java/src/org/forester/util/BasicDescriptiveStatistics.java
index 8ec95e7..0818951 100644
--- a/forester/java/src/org/forester/util/BasicDescriptiveStatistics.java
+++ b/forester/java/src/org/forester/util/BasicDescriptiveStatistics.java
@@ -39,11 +39,17 @@ public class BasicDescriptiveStatistics implements DescriptiveStatistics {
     private double       _max;
     private double       _sigma;
     private boolean      _recalc_sigma;
+    private String       _desc;
 
     public BasicDescriptiveStatistics() {
         init();
     }
 
+    public BasicDescriptiveStatistics( final String desc ) {
+        init();
+        setDescription( desc );
+    }
+
     /* (non-Javadoc)
      * @see org.forester.util.DescriptiveStatisticsI#addValue(double)
      */
@@ -140,9 +146,6 @@ public class BasicDescriptiveStatistics implements DescriptiveStatistics {
         return _sum;
     }
 
-    /* (non-Javadoc)
-     * @see org.forester.util.DescriptiveStatisticsI#getSummaryAsString()
-     */
     @Override
     public String getSummaryAsString() {
         validate();
@@ -151,9 +154,6 @@ public class BasicDescriptiveStatistics implements DescriptiveStatistics {
         return "" + mean + ( ( char ) 177 ) + sd + " [" + getMin() + "..." + getMax() + "]";
     }
 
-    /* (non-Javadoc)
-     * @see org.forester.util.DescriptiveStatisticsI#getValue(int)
-     */
     @Override
     public double getValue( final int index ) {
         validate();
@@ -167,6 +167,7 @@ public class BasicDescriptiveStatistics implements DescriptiveStatistics {
         _max = -Double.MAX_VALUE;
         _sigma = 0.0;
         _recalc_sigma = true;
+        _desc = "";
     }
 
     /* (non-Javadoc)
@@ -356,4 +357,19 @@ public class BasicDescriptiveStatistics implements DescriptiveStatistics {
     public static double sampleStandardUnit( final double value, final double mean, final double sd ) {
         return ( value - mean ) / sd;
     }
+
+    @Override
+    public List<Double> getData() {
+        return _data;
+    }
+
+    @Override
+    public void setDescription( final String desc ) {
+        _desc = desc;
+    }
+
+    @Override
+    public String getDescription() {
+        return _desc;
+    }
 }