X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Futil%2FForesterConstants.java;h=63ffac3681a4ea161909b300ce97502888944823;hb=6062dfb954cafb6af22e01af89222888d9d5ba66;hp=3edec56f07ac01d0442adaeb86d4490ae0b517e2;hpb=48f7a89be9d34f1930a1f863e608235cc27184c5;p=jalview.git diff --git a/forester/java/src/org/forester/util/ForesterConstants.java b/forester/java/src/org/forester/util/ForesterConstants.java index 3edec56..63ffac3 100644 --- a/forester/java/src/org/forester/util/ForesterConstants.java +++ b/forester/java/src/org/forester/util/ForesterConstants.java @@ -5,7 +5,7 @@ // Copyright (C) 2000-2009 Christian M. Zmasek // Copyright (C) 2007-2009 Burnham Institute for Medical Research // All rights reserved -// +// // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either @@ -15,18 +15,20 @@ // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. -// +// // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA // // Contact: phylosoft @ gmail . com -// WWW: www.phylosoft.org/forester +// WWW: https://sites.google.com/site/cmzmasek/home/software/forester package org.forester.util; public final class ForesterConstants { + public final static String FORESTER_VERSION = "1.027+"; + public final static String FORESTER_DATE = "130409"; public final static String PHYLO_XML_VERSION = "1.10"; public final static String PHYLO_XML_LOCATION = "http://www.phyloxml.org"; public final static String PHYLO_XML_XSD = "phyloxml.xsd"; @@ -36,4 +38,8 @@ public final class ForesterConstants { public final static String UTF8 = "UTF-8"; public final static String PHYLO_XML_REFERENCE = "Han MV and Zmasek CM (2009): \"phyloXML: XML for evolutionary biology and comparative genomics\", BMC Bioinformatics 10:356"; public final static boolean RELEASE = false; + + public enum PhylogeneticTreeFormats { + NH, NHX, NEXUS, PHYLOXML + } }