X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Futil%2FForesterUtil.java;h=190f84da807c1f86b58adaafbae8ab2116e12bc4;hb=88718609970e490e94727d12ebbca1270ba2c0a7;hp=48d973b500c4c6fdaf95c192f82888caf7769b69;hpb=fea4064e24c6cb362b0e033cf7047afd20f5f53f;p=jalview.git

diff --git a/forester/java/src/org/forester/util/ForesterUtil.java b/forester/java/src/org/forester/util/ForesterUtil.java
index 48d973b..190f84d 100644
--- a/forester/java/src/org/forester/util/ForesterUtil.java
+++ b/forester/java/src/org/forester/util/ForesterUtil.java
@@ -865,6 +865,21 @@ public final class ForesterUtil {
             else if ( tax_group.equals( TaxonomyGroups.BACTERIA ) ) {
                 return TaxonomyColors.BACTERIA_COLOR;
             }
+            else if ( tax_group.equals( TaxonomyGroups.VIRUSES ) ) {
+                return TaxonomyColors.VIRUSES_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.ALPHAHERPESVIRINAE ) ) {
+                return TaxonomyColors.ALPHAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.BETAHERPESVIRINAE ) ) {
+                return TaxonomyColors.BETAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.GAMMAHERPESVIRINAE ) ) {
+                return TaxonomyColors.GAMMAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.OTHER ) ) {
+                return TaxonomyColors.OTHER_COLOR;
+            }
         }
         return null;
     }
@@ -945,6 +960,21 @@ public final class ForesterUtil {
         else if ( tax.equalsIgnoreCase( TaxonomyGroups.BACTERIA ) ) {
             return TaxonomyGroups.BACTERIA;
         }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.BACTERIA ) ) {
+            return TaxonomyGroups.BACTERIA;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.VIRUSES ) ) {
+            return TaxonomyGroups.VIRUSES;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.ALPHAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.ALPHAHERPESVIRINAE;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.BETAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.BETAHERPESVIRINAE ;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.GAMMAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.GAMMAHERPESVIRINAE;
+        }
         return null;
     }