X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Futil%2FTaxonomyUtil.java;h=a8f38990a987b1acebf21daca1524d57378beb77;hb=91d1f3e69ae616d45f4f2f421cbb436aaccc7cfc;hp=df45c1dcc0d9280d062f421386f8a0112e64aed1;hpb=fd93d9051360270863585a005a90e1ee307b314b;p=jalview.git

diff --git a/forester/java/src/org/forester/util/TaxonomyUtil.java b/forester/java/src/org/forester/util/TaxonomyUtil.java
index df45c1d..a8f3899 100644
--- a/forester/java/src/org/forester/util/TaxonomyUtil.java
+++ b/forester/java/src/org/forester/util/TaxonomyUtil.java
@@ -90,6 +90,11 @@ public final class TaxonomyUtil {
         _default_taxcode_taxgroup_map.put( "BRAFL", "deuterostomia" );
         _default_taxcode_taxgroup_map.put( "SACKO", "deuterostomia" );
         _default_taxcode_taxgroup_map.put( "STRPU", "deuterostomia" );
+        _default_taxcode_taxgroup_map.put( "FICAL", "deuterostomia" );
+        _default_taxcode_taxgroup_map.put( "OPHHA", "deuterostomia" );
+        _default_taxcode_taxgroup_map.put( "PYTBI", "deuterostomia" );
+        _default_taxcode_taxgroup_map.put( "LYTVA", "deuterostomia" );
+        _default_taxcode_taxgroup_map.put( "PATMI", "deuterostomia" );
         _default_taxcode_taxgroup_map.put( "DROSE", "protostomia" );
         _default_taxcode_taxgroup_map.put( "DROSI", "protostomia" );
         _default_taxcode_taxgroup_map.put( "DROME", "protostomia" );
@@ -288,6 +293,7 @@ public final class TaxonomyUtil {
         _default_taxcode_taxgroup_map.put( "PICAB", "embryophyta" );
         _default_taxcode_taxgroup_map.put( "SELML", "embryophyta" );
         _default_taxcode_taxgroup_map.put( "PHYPA", "embryophyta" );
+        _default_taxcode_taxgroup_map.put( "AMBTC", "embryophyta" );
         _default_taxcode_taxgroup_map.put( "OSTLU", "chlorophyta" );
         _default_taxcode_taxgroup_map.put( "ORCXX", "chlorophyta" );
         _default_taxcode_taxgroup_map.put( "OSTTA", "chlorophyta" );
@@ -322,6 +328,8 @@ public final class TaxonomyUtil {
         _default_taxcode_taxgroup_map.put( "TETTS", "alveolata" );
         _default_taxcode_taxgroup_map.put( "OTRXX", "alveolata" );
         _default_taxcode_taxgroup_map.put( "BLEJA", "alveolata" );
+        _default_taxcode_taxgroup_map.put( "PERM5", "alveolata" );
+        _default_taxcode_taxgroup_map.put( "ICHMG", "alveolata" );
         _default_taxcode_taxgroup_map.put( "FCYXX", "stramenopiles" );
         _default_taxcode_taxgroup_map.put( "PHATR", "stramenopiles" );
         _default_taxcode_taxgroup_map.put( "THAPS", "stramenopiles" );