X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fjava%2Fsrc%2Forg%2Fforester%2Futil%2FTaxonomyUtil.java;h=ee5427a61db67fdefa4e8f1d90460a3fb3c92dbc;hb=4e20c9132065232b26afd38e8ce371b353a2686d;hp=496c9391fc289bfe55336201538a6f091e77cfb7;hpb=657f1b11d016bc2614075cfdd80b27701da408f0;p=jalview.git diff --git a/forester/java/src/org/forester/util/TaxonomyUtil.java b/forester/java/src/org/forester/util/TaxonomyUtil.java index 496c939..ee5427a 100644 --- a/forester/java/src/org/forester/util/TaxonomyUtil.java +++ b/forester/java/src/org/forester/util/TaxonomyUtil.java @@ -26,6 +26,9 @@ public final class TaxonomyUtil { } private final static Map _default_taxcode_taxgroup_map = new HashMap(); static { + put( "BUFBU", "deuterostomia" ); + put( "NOTVI", "deuterostomia" ); + put( "SIRIN", "deuterostomia" ); put( "ASTMX", "deuterostomia" ); put( "CALMI", "deuterostomia" ); put( "FICAL", "deuterostomia" ); @@ -166,6 +169,12 @@ public final class TaxonomyUtil { put( "SCHMA", "protostomia" ); put( "CLOSI", "protostomia" ); put( "SCHMD", "protostomia" ); + put( "ANOGL", "protostomia" ); + put( "BLAGE", "protostomia" ); + put( "ZOONE", "protostomia" ); + put( "SCHAM", "protostomia" ); + put( "GRYPE", "protostomia" ); + put( "ONCFA", "protostomia" ); put( "ACRDI", "cnidaria" ); put( "NEMVE", "cnidaria" ); put( "HYDVU", "cnidaria" ); @@ -361,6 +370,7 @@ public final class TaxonomyUtil { put( "ALIXX", "stramenopiles" ); put( "BLAHO", "stramenopiles" ); put( "BIGNA", "rhizaria" ); + put( "RETFI", "rhizaria" ); put( "TRYB2", "excavata" ); put( "TRYCR", "excavata" ); put( "LEIMA", "excavata" );