X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fruby%2Fevoruby%2Fexe%2Ftest.rb;h=24c31852d7ee38dc257cf14e06f93343d9989ded;hb=8edcad512a3039c1940c03b72dd3d5c2cb8509ac;hp=8a4431d5a34ddb048746f5b18518e5d0a51977a8;hpb=253a714c2440558d7c70fe30cac5d7b093798968;p=jalview.git diff --git a/forester/ruby/evoruby/exe/test.rb b/forester/ruby/evoruby/exe/test.rb index 8a4431d..24c3185 100755 --- a/forester/ruby/evoruby/exe/test.rb +++ b/forester/ruby/evoruby/exe/test.rb @@ -25,9 +25,9 @@ require 'lib/evo/io/writer/fasta_writer' require 'lib/evo/io/parser/fasta_parser' require 'lib/evo/io/parser/ncbi_tseq_parser' require 'lib/evo/io/parser/hmmsearch_domain_extractor' -require 'lib/evo/apps/domain_sequence_extractor' -require 'lib/evo/apps/hmmscan_parser' -require 'lib/evo/apps/domains_to_forester' +require 'lib/evo/tool/domain_sequence_extractor' +require 'lib/evo/tool/hmmscan_summary' +require 'lib/evo/tool/domains_to_forester' require 'lib/evo/io/parser/general_msa_parser' require 'lib/evo/io/parser/basic_table_parser' require 'lib/evo/util/command_line_arguments' @@ -823,7 +823,7 @@ module Evoruby def test_hmmscan_parser() begin - h = Evoruby::HmmscanParser.new() + h = Evoruby::HmmscanSummary.new() rescue Exception => e puts() puts( e.to_s )