X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=forester%2Fruby%2Fscripts%2Fclean_fasta.rb;h=1a1705b4ec7c5e3a800d575430f1e43475175791;hb=710880be692b7701f99e471c7096aa985f87817a;hp=2530746c9f03b81ce9226b5ae9d0d89ee337a9cd;hpb=42103714ff180f2fe5082bb4a17a545337ee784e;p=jalview.git

diff --git a/forester/ruby/scripts/clean_fasta.rb b/forester/ruby/scripts/clean_fasta.rb
index 2530746..1a1705b 100644
--- a/forester/ruby/scripts/clean_fasta.rb
+++ b/forester/ruby/scripts/clean_fasta.rb
@@ -6,7 +6,7 @@ File.open(infile, 'r') do |f|
    while line = f.gets
        if line =~ /(>.+)~.+/
           line = $1
-       elsif line =~ /(>.+)|NAME=.+/
+       elsif line =~ /(>.+)\|NAME=.+/
            line = $1
        end
        puts line