X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=gradle.properties;h=b99cdca2d95e65fd55cb3de5b3d0f0352fce7513;hb=490bea038483dcc853766de08a8971668930f43a;hp=782a495dcfcbc60de3ae5bd274f45f90de9940c0;hpb=3237829bba602ca59be28b09fcad1cb3f14f19ac;p=jalview.git

diff --git a/gradle.properties b/gradle.properties
index 782a495..b99cdca 100644
--- a/gradle.properties
+++ b/gradle.properties
@@ -1,4 +1,6 @@
-org.gradle.jvmargs=-Xmx1536m -Xms512m
+# Convention for properties.  Read from gradle.properties, use lower_case_underlines for property names.
+# For properties set within build.gradle, use camelCaseNoSpace.
+#
 
 jalviewDir = .
 
@@ -23,38 +25,35 @@ proxyHost = sqid
 jalview_keyalg = SHA1withRSA
 jalview_keydig = SHA1
 
-testngGroups = Functional
-testngExcludedGroups = 
+testng_groups = Functional
+testng_excluded_groups = 
 
 j8libDir = j8lib
 j11libDir = j11lib
 resource_dir = resources
 help_parent_dir = help
 help_dir = help
-docDir = doc
-schemaDir = schemas
+doc_dir = doc
 classes_dir = classes
-examplesDir = examples
 clover = false
-use_clover = false
-cloverReportJVMHeap = 2g
-cloverReportJVMArgs = -Dfile.encoding=UTF-8
-cloverReportHTMLOptions = 
-cloverReportXMLOptions =
-cloverClassesDir = clover-classes
-cloverSourcesInstrDir = sources-instr
-packageDir = dist
+clover_classes_dir = clover-classes
+clover_sources_instr_dir = clover-instr
+clover_report_dir = clover-report
+clover_lib_dir = utils/clover/lib
+cloverreport_mem = 2g
+cloverreport_jvmargs = -Dfile.encoding=UTF-8
+cloverreport_html_options = 
+cloverreport_xml_options =
+package_dir = dist
 ARCHIVEDIR =
-outputJar = jalview.jar
 
-testOutputDir = tests
-utilsDir = utils
+test_output_dir = tests
+utils_dir = utils
 
 build_properties_file = .build_properties
 application_codebase = *.jalview.org
-mainClass = jalview.bin.Jalview
-shadowJarMainClass = jalview.bin.Launcher
-launcherClass = jalview.bin.Jalview
+main_class = jalview.bin.Jalview
+shadow_jar_main_class = jalview.bin.Launcher
 
 jalview_name = Jalview
 
@@ -111,6 +110,8 @@ j11libDir = j11lib
 j11modDir = j11mod
 j11modules = com.sun.istack.runtime,com.sun.xml.bind,com.sun.xml.fastinfoset,com.sun.xml.streambuffer,com.sun.xml.txw2,com.sun.xml.ws.policy,java.activation,java.annotation,java.base,java.compiler,java.datatransfer,java.desktop,java.logging,java.management,java.management.rmi,java.naming,java.prefs,java.rmi,java.scripting,java.security.sasl,java.sql,java.xml,java.xml.bind,java.xml.soap,java.xml.ws,javax.jws,jdk.httpserver,jdk.jsobject,jdk.unsupported,jdk.xml.dom,org.jvnet.mimepull,org.jvnet.staxex,javax.servlet.api,java.ws.rs
 
+flexmark_css = utils/doc/github.css
+
 install4j_home_dir = ~/buildtools/install4j8
 install4j_copyright_message = ...
 install4j_bundle_id = org.jalview.jalview-desktop
@@ -129,9 +130,6 @@ OSX_KEYSTORE =
 OSX_KEYPASS =
 JSIGN_SH = echo
 
-pandoc_exec = /usr/local/bin/pandoc,/usr/bin/pandoc
-dev = false
-
 CHANNEL=LOCAL
 getdown_channel_base = https://www.jalview.org/getdown
 getdown_app_dir_release = release
@@ -146,6 +144,7 @@ bamboo_channelbase = https://builds.jalview.org/browse
 bamboo_planKey = 
 bamboo_getdown_channel_suffix = /latest/artifact/shared/getdown-channel
 
+eclipse_codestyle_file = utils/eclipse/JalviewCodeStyle.xml
 eclipse_extra_jdt_prefs_file = utils/eclipse/org.eclipse.jdt.core.jalview.prefs
 eclipse_project_name = jalview
 eclipse_bin_dir = bin
@@ -158,7 +157,7 @@ jalviewjs_eclipse_root = ~/buildtools/eclipse/jee-2019-09
 
 jalviewjs_eclipse_dropins_dir = utils/jalviewjs/eclipse/dropins
 jalviewjs_swingjs_zip = swingjs/SwingJS-site.zip
-jalviewjs_j2s_plugin = swingjs/net.sf.j2s.core.jar
+jalviewjs_j2s_plugin = swingjs/net.sf.j2s.core-j11.jar
 jalviewjs_libjs_dir = utils/jalviewjs/libjs
 jalviewjs_site_resource_dir = utils/jalviewjs/site-resources
 jalviewjs_classlists_dir = utils/jalviewjs/classlists
@@ -182,6 +181,7 @@ jalviewjs_core_name = _jalview
 jalviewjs_name = JalviewJS
 jalviewjs_core_key = core
 #jalviewjs_core_key = preloadCore
+jalviewjs_ignore_transpile_errors = true
 
 j2s.compiler.status = enable
 #j2s.site.directory = null ## site defined from buildDir+'/jalviewjs/'+jalviewjs_site_dir
@@ -210,6 +210,7 @@ j2s_coretemplate_html = utils/jalviewjs/coretemplate.html
 jalviewjs_j2s_transpile_stdout = j2s-transpile.out
 #jalviewjs_j2s_stderr = j2s-transpile.err # all going into out
 jalviewjs_j2s_to_console = true
+jalviewjs_closure_compiler = tools/closure_compiler.jar
 jalviewjs_j2s_closure_stdout = j2s-closure.out