X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Fmenus%2Falwfile.html;h=653eedaa9f29215e02f7ca09f42a70e8930595ea;hb=433801a3edef339c0d679eb87e07498ab1325457;hp=57ffa08525b7c870ad2a09a5efcdc419f06d85bf;hpb=44d68d55d9c85bf7b28853feeebc4b901c4a8392;p=jalview.git diff --git a/help/help/html/menus/alwfile.html b/help/help/html/menus/alwfile.html index 57ffa08..653eeda 100755 --- a/help/help/html/menus/alwfile.html +++ b/help/help/html/menus/alwfile.html @@ -130,12 +130,9 @@ annotations.
  • Load VCF File
    -
    Load VCF annotations from a plain text or tab-indexed file. -
    This option is offered for nucleotide alignments, and requires at least one - sequence to have known genomic coordinates. -
    Genomic coordinates are attached to entries retrieved from Ensembl. -
    Support for VCF was added in Jalview 2.11. -
  • + Load VCF annotations from a plain text, or indexed file (.csi,.tsi). +
    Only available for nucleotide alignments, and requires at least one + sequence to have known genomic coordinates.
  • Close (Control W)
    Close the alignment window. Make sure you have saved your alignment before you close - either as a Jalview project or by using the Save