X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Freleases.html;h=5d08641ab829ef3315d1252b4d923e781aab0a94;hb=76835e718ecdb7603df6f5892dca8396f059174f;hp=c67dd79006584e9c8c1fe56e5d4cb4cd8e28ae75;hpb=33ba54476b2e87a4a8b07f1783447ab7968ba09c;p=jalview.git

diff --git a/help/help/html/releases.html b/help/help/html/releases.html
index c67dd79..5d08641 100755
--- a/help/help/html/releases.html
+++ b/help/help/html/releases.html
@@ -92,7 +92,7 @@ li:before {
             EMBL flat file
           </li>
           <li>
-            <!-- JAL-3677 -->Improved warning messages, debug logging
+            <!-- JAL-3667 -->Improved warning messages, debug logging
             and fixed Retry action when Jalview encounters errors when
             saving or making backup files.
           </li>
@@ -122,6 +122,12 @@ li:before {
       <td align="left" valign="top">
         <ul>
           <li>
+            <!-- JAL-3691 -->Conservation and Quality tracks are shown
+            but not calculated and no protein or DNA score models are
+            available for tree/PCA calculation when launched with
+            Turkish language locale
+          </li>
+          <li>
             <!-- JAL-3493 -->Escape does not clear highlights on the
             alignment (Since Jalview 2.10.3)
           </li>
@@ -144,6 +150,10 @@ li:before {
             to the position under the cursor
           </li>
           <li>
+            <!-- JAL-3673 -->Sequence ID for reference sequence is
+            clipped when Right align Sequence IDs enabled
+          </li>
+          <li>
             <!-- JAL-2983 -->Slider with negative range values not
             rendered correctly in VAqua4 (Since 2.10.4)
           </li>
@@ -151,6 +161,19 @@ li:before {
             <!-- JAL-3685 -->Single quotes not displayed correctly in
             internationalised text for some messages and log output
           </li>
+          <li>
+            <!-- JAL-3490 -->Find doesn't report matches that span
+            hidden gapped columns
+          </li>
+          <li>
+            <!-- JAL-3597 -->Resolved memory leaks in Tree and PCA
+            panels, Alignment viewport and annotation renderer.
+          </li>
+          <li>
+            <!-- JAL-3561 -->Jalview ignores file format parameter
+            specifying output format when exporting an alignment via the
+            command line
+          </li>
         </ul> <em>Developing Jalview</em>
         <ul>
           <li>
@@ -161,8 +184,9 @@ li:before {
         </ul> <em>New Known defects</em>
         <ul>
           <li>
-            <!-- JAL-3701 -->Stale build data in jalview standalone jar
-            builds (only affects 2.11.1.1 branch)
+            <!-- JAL-3576 -->Co-located features exported and re-imported
+            are ordered differently when shown on alignment and in
+            tooltips. (Also affects v2.11.1.0)
           </li>
           <li>
             <!-- JAL-3667 -->Windows 10: For a minority of users, if
@@ -171,6 +195,19 @@ li:before {
             Workaround is to try to save the file again, and if that
             fails, delete the original file and save in place.
           </li>
+          <li>
+            <!-- JAL-3702 -->Drag and drop of alignment file onto
+            alignment window not working correctly when in a HiDPI
+            scaled mode in Linux
+          </li>
+          <li>
+            <!-- JAL-3701 -->Stale build data in jalview standalone jar
+            builds (only affects 2.11.1.1 branch)
+          </li>
+          <li>
+            <!-- JAL-3127 -->Sequence ID colourscheme not re-applied
+            when alignment view restored from project (since Jalview 2.11.0)
+          </li>
         </ul>
       </td>
     </tr>