X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FwhatsNew.html;h=59281700347ebe2261d80bdfe929483cbac755ee;hb=908e8e3c1789cf03f50885d75987cf7d0336f748;hp=c5f4f7548800dd284ab8e2453cad09847c86261a;hpb=3718374f2f04d51deff53707e4e6cbd52d144bf1;p=jalview.git diff --git a/help/help/html/whatsNew.html b/help/help/html/whatsNew.html index c5f4f75..5928170 100755 --- a/help/help/html/whatsNew.html +++ b/help/help/html/whatsNew.html @@ -24,82 +24,31 @@
- Jalview 2.11 - new installer and new capabilities
+ Welcome to Jalview Version $$Version-Rel$$ !!
Please take a
+ look at the release
+ notes for this build.
Jalview 2.11 introduces support for loading VCF files, and new - filters and shading models for sequence features. Under the hood, - we've addressed many bugs, and also made some important changes in - the way the Jalview desktop is installed and launched.
-- The full list of bugs fixed in this release can be found in the 2.11 Release Notes. + Jalview 2.11.1.4
-- Jalview and Java 11, 13, and onwards +
Jalview 2.11.1.4 is the fourth patch release in the 2.11.1 + series. One critical bug was fixed in this release - when Jalview + would occasionally hang when viewing structures in Jmol. This release + also introduces a number of new configuration options for disabling + web service connections used by the Jalview Debian package.
-The Jalview application comes bundled with its own independent - Java installation. Version 2.11.0 includes an AdoptOpenJDK Java 1.8 - runtime which will be kept up to date. A Java 11 based installation - is available from the Jalview development pages.
- Saying goodbye...
Long time Jalview users will notice
- that this release no longer features the
- Vamsas desktop menu, or a Distributed
- Annotation System (DAS) tab on the feature settings dialog.
- DAS is no longer supported by major bioinformatics databases, and we
- decided that it was no longer feasible to maintain either JDAS or
- the VAMSAS client library which rely on out-dated Java XML binding
- technologies.
+ For the full release notes, see the Jalview 2.11.1.4
+ release notes.
- Next up...
Keep an eye on the Jalview web site for
- news about JalviewJS - the web based JavaScript implementation of
- Jalview. Whilst Jalview 2.11 has been in development, we have also
- been working with Prof. Bob Hanson (Jmol and JSmol) to enable
- Jalview to run as both a Java application and a JavaScript app in a
- web page. To find out more, see the JalviewJS web page.
+ Known Issues
New known issues in this release affect recovery of CDS/Protein + relationships from project files, and interactive selection of + protein sequences from a tree built on linked nucleotide sequences. + We will provide patches for these issues as soon as possible.
+