X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FwhatsNew.html;h=5ecf2937ae2760b0d61699127430062ff9c14e22;hb=fbc163d1dfc48187b15af561d07b1c62778920d1;hp=4e7be71fc9e024197f25c1e381821e3b2fe0751c;hpb=3ff0d70b248749cdf55048b8f13fc3e2e011c1d2;p=jalview.git diff --git a/help/help/html/whatsNew.html b/help/help/html/whatsNew.html index 4e7be71..5ecf293 100755 --- a/help/help/html/whatsNew.html +++ b/help/help/html/whatsNew.html @@ -50,6 +50,7 @@ allows predicted and observed 3D models for proteins in Uniprot from a range of resources, including AlphaFold DB, SWISS-MODEL and a growing number of other resources. +
  • Easier configuration of Jalview's memory allocation

    Retrieval of 3D models via 3D-Beacons
    The 3D-Beacons network (

    Support for viewing structures with ChimeraX and - Pymol
    Structures Preferences tab provides new options - allowing ChimeraX and Pymol to be used for visualising external 3D - structures. Jalview 2.11.2 has been tested with Pymol 2.5.0 - (community) and 2.5.2 (incentive). For ChimeraX, we recommend - using v1.3 or later. Jalview's 3D structure viewer system has been + Pymol
    Jalview's 3D structure viewer system has been re-architected to allow easier integration of external structure viewers, and takes advantage of the strucViz2 Chimera communications library developed by Scooter Morris (
    doi:10.1093/bioinformatics/btm329). + The Structures Preferences tab provides new options + allowing ChimeraX and Pymol to be used for visualising external 3D + structures. Jalview 2.11.2 has been tested with Pymol 2.5.0 + (community) and 2.5.2 (incentive). For ChimeraX, we recommend + using v1.3 or later.

    For the full release notes, see the Jalview 2.11.1.4 + href="releases.html#Jalview.2.11.2.0">the Jalview 2.11.2.0 release notes.

    Known Issues

    -

    New known issues in this release affect recovery of - CDS/Protein relationships from project files, and interactive - selection of protein sequences from a tree built on linked - nucleotide sequences. We will provide patches for these issues as - soon as possible.

    +