X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2FwhatsNew.html;h=5ecf2937ae2760b0d61699127430062ff9c14e22;hb=fbc163d1dfc48187b15af561d07b1c62778920d1;hp=4e7be71fc9e024197f25c1e381821e3b2fe0751c;hpb=3ff0d70b248749cdf55048b8f13fc3e2e011c1d2;p=jalview.git diff --git a/help/help/html/whatsNew.html b/help/help/html/whatsNew.html index 4e7be71..5ecf293 100755 --- a/help/help/html/whatsNew.html +++ b/help/help/html/whatsNew.html @@ -50,6 +50,7 @@ allows predicted and observed 3D models for proteins in Uniprot from a range of resources, including AlphaFold DB, SWISS-MODEL and a growing number of other resources. +
Retrieval of 3D models via 3D-Beacons
Support for viewing structures with ChimeraX and
- Pymol
For the full release notes, see the Jalview 2.11.1.4
+ href="releases.html#Jalview.2.11.2.0">the Jalview 2.11.2.0
release notes.
Known Issues
New known issues in this release affect recovery of
- CDS/Protein relationships from project files, and interactive
- selection of protein sequences from a tree built on linked
- nucleotide sequences. We will provide patches for these issues as
- soon as possible.
The
3D-Beacons network (
Structures Preferences tab provides new options
- allowing ChimeraX and Pymol to be used for visualising external 3D
- structures. Jalview 2.11.2 has been tested with Pymol 2.5.0
- (community) and 2.5.2 (incentive). For ChimeraX, we recommend
- using v1.3 or later. Jalview's 3D structure viewer system has been
+ Pymol
Jalview's 3D structure viewer system has been
re-architected to allow easier integration of external structure
viewers, and takes advantage of the strucViz2 Chimera
communications library developed by Scooter Morris (doi:10.1093/bioinformatics/btm329).
+ The Structures Preferences tab provides new options
+ allowing ChimeraX and Pymol to be used for visualising external 3D
+ structures. Jalview 2.11.2 has been tested with Pymol 2.5.0
+ (community) and 2.5.2 (incentive). For ChimeraX, we recommend
+ using v1.3 or later.