X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp.jhm;h=41d245d383e7e356534b3fd12d273411ece600ab;hb=e3f4349374e532d0f9bb2bc163ff1783ca030fd6;hp=210933b7b28e48b1bdb68090fe77ce356446f8ca;hpb=9fb80b5bf530d18172a8e01d31d8c3555591a1bb;p=jalview.git

diff --git a/help/help.jhm b/help/help.jhm
index 210933b..41d245d 100755
--- a/help/help.jhm
+++ b/help/help.jhm
@@ -10,13 +10,14 @@
    <mapID target="cursor" url="html/features/cursorMode.html"/>
    <mapID target="search" url="html/features/search.html"/>   
    <mapID target="webservice" url="html/webServices/index.html"/>
+   <mapID target="msaservice" url="html/webServices/msaclient.html"/>
    <mapID target="clustal" url="html/webServices/clustalw.html"/>
    <mapID target="muscle" url="html/webServices/muscle.html"/>
+   <mapID target="mafft" url="html/webServices/mafft.html"/>
    <mapID target="jnet" url="html/webServices/jnet.html"/>
    <mapID target="seqfetch" url="html/features/seqfetch.html"/>
    <mapID target="seqfeatures" url="html/features/seqfeatures.html"/>
    <mapID target="seqfeatures.settings" url="html/features/featuresettings.html"/>
-   <mapID target="pdbviewer" url="html/features/pdbviewer.html"/>
    <mapID target="viewingpdbs" url="html/features/viewingpdbs.html"/>
    <mapID target="preferences" url="html/features/preferences.html"/>     
    <mapID target="io" url="html/io/index.html"/>
@@ -24,16 +25,18 @@
    <mapID target="export" url="html/io/export.html"/>
    <mapID target="alformats" url="html/io/fileformats.html"/>
    <mapID target="annotations.fileformat" url="html/features/annotationsFormat.html"/>
-   <mapID target="features.fileformat" url="html/features/featuresFormat.html"/>   
+   <mapID target="features.fileformat" url="html/features/featuresFormat.html"/>
+   <mapID target="das.settings" url="html/features/dassettings.html"/>
+   <mapID target="das.viewing" url="html/features/dasfeatures.html"/>
    <mapID target="edit" url="html/editing/index.html"/>
-   <mapID target="edit.selareas" url="html/editing/selectionAreas.html"/>
    <mapID target="jalarchive" url="html/features/jalarchive.html"/>
    <mapID target="trees" url="html/calculations/tree.html"/>
    <mapID target="sorting" url="html/calculations/sorting.html"/>
    <mapID target="pca" url="html/calculations/pca.html"/>
    <mapID target="pairwise" url="html/calculations/pairwise.html"/>
    <mapID target="redundancy" url="html/calculations/redundancy.html"/>
-   
+   <mapID target="hiddenRegions" url="html/features/hiddenRegions.html"/>
+   <mapID target="recoverInputdata" url="html/calculations/recoverInputdata.html"/>
    <mapID target="colours" url="html/colourSchemes/index.html" />
    <mapID target="colours.clustal" url="html/colourSchemes/clustal.html"/>
    <mapID target="colours.zappo" url="html/colourSchemes/zappo.html" />