X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fcalculations%2Fconservation.html;h=453552535b69df8f86dfd4e7f209a731fb7b401c;hb=adca107ff292173bc844ad4a5c6c7eba958ad24a;hp=9cb8ce1a95a9195f6b784d824e709a40cfc0add4;hpb=94115f9af30575885ef1e3f843e0dd381e579e08;p=jalview.git diff --git a/help/html/calculations/conservation.html b/help/html/calculations/conservation.html index 9cb8ce1..4535525 100755 --- a/help/html/calculations/conservation.html +++ b/help/html/calculations/conservation.html @@ -40,8 +40,8 @@ 9 No. 6 (745-756)). View an HTML version of the paper + href="http://www.compbio.dundee.ac.uk/papers/amas/amas3d.html">View + an HTML version of the paper
Conservation is measured as a numerical index reflecting the
@@ -68,13 +68,15 @@
Colouring an alignment by conservation
Conservation scores can be used to colour an alignment. This is
explained further in the help page for conservation colouring.
+ href="../colourSchemes/conservation.html">conservation
+ colouring.
- Group conservation
- If sequence groups have been defined, then selecting option 'Group Conservation' in the Annotations menu will
- result in Conservation being calculated for each group, as well as the alignment as a whole.
+ Group conservation
If sequence groups have
+ been defined, then selecting option 'Group Conservation' in the Annotations menu will
+ result in Conservation being calculated for each group, as well as
+ the alignment as a whole.