X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fcalculations%2Ftree.html;h=1579043961e7ff3d971252129aa064ecee280a3f;hb=a45774ee31d9f35d4eff46d54d7deab719afb092;hp=1e2e0d0a7dada985acad6fcbb8ad27d91923ea5f;hpb=cf1d95b1485a70f76f58af1e2d7827dbd0f94014;p=jalview.git diff --git a/help/html/calculations/tree.html b/help/html/calculations/tree.html index 1e2e0d0..1579043 100755 --- a/help/html/calculations/tree.html +++ b/help/html/calculations/tree.html @@ -1,10 +1,29 @@ + Tree Calculation

Calculation of trees from alignments

Trees are calculated on either the complete alignment, or just the currently selected group of sequences, using the functions in the -Calculate→Calculate tree submenu. There are +Calculate→Calculate tree submenu. +Once calculated, trees are displayed in a new tree viewing window. There are four different calculations, using one of two distance measures and constructing the tree from one of two algorithms :