X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FcolourSchemes%2FabovePID.html;fp=help%2Fhtml%2FcolourSchemes%2FabovePID.html;h=5f10c7571e1350a51f99b2b7344c755ddc5b7e1e;hb=6fa9683bef52d6709abb81840681e4fa452cafe7;hp=0000000000000000000000000000000000000000;hpb=acc0719b1f2f3e7632b981e9ea6f2a76b169f729;p=jalview.git
diff --git a/help/html/colourSchemes/abovePID.html b/help/html/colourSchemes/abovePID.html
new file mode 100755
index 0000000..5f10c75
--- /dev/null
+++ b/help/html/colourSchemes/abovePID.html
@@ -0,0 +1,20 @@
+
+
+
+
+
+
+ Colouring above a percentage identity threshold
+ Selecting this option causes the colour scheme to be applied to only those
+ residues that occur in that column more than a certain percentage of the time.
+ For instance selecting the threshold to be 100 will only colour those columns
+ with 100 % identity. This threshold option can be applied to the Zappo, Taylor,
+ Hydrophobicity and User colour schemes.
+
+