X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FcolourSchemes%2Fconservation.html;h=88ef6ba4cc7d6d66ab10dc2dc4e03adf31a233cc;hb=801c367379086cc38bf4d3059a8e30ca9f4e78c0;hp=ccd361503001d0762f83ba134938de3abda2810b;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git

diff --git a/help/html/colourSchemes/conservation.html b/help/html/colourSchemes/conservation.html
index ccd3615..88ef6ba 100755
--- a/help/html/colourSchemes/conservation.html
+++ b/help/html/colourSchemes/conservation.html
@@ -1,7 +1,7 @@
 <html>
 <!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -33,9 +33,9 @@
     alignment analysis (Livingstone C.D. and Barton G.J. (1993), Protein
     Sequence Alignments: A Strategy for the Hierarchical Analysis of
     Residue Conservation.CABIOS Vol. 9 No. 6 (745-756)). See the <a
-      href="../calculations/conservation.html"
-    >conservation calculation</a> help page for a more thorough
-    explanation of the calculation.
+      href="../calculations/conservation.html">conservation
+      calculation</a> help page for a more thorough explanation of the
+    calculation.
   </p>
   <p>For an already coloured alignment, the conservation index at
     each alignment position is used to modify the shading intensity of
@@ -46,11 +46,10 @@
   <p>
     Conservation can be calculated over all sequences in an alignment,
     or just within specific groups (such as those defined by <a
-      href="../calculations/tree.html"
-    >phylogenetic tree partitioning</a>). The option 'apply to all groups'
-    controls whether the contrast slider value will be applied to the
-    indices for the currently selected group, or all groups defined over
-    the alignment.
+      href="../calculations/tree.html">phylogenetic tree
+      partitioning</a>). The option 'apply to all groups' controls whether
+    the contrast slider value will be applied to the indices for the
+    currently selected group, or all groups defined over the alignment.
   </p>
 </body>
 </html>
