X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FcolourSchemes%2Findex.html;fp=help%2Fhtml%2FcolourSchemes%2Findex.html;h=51d0738325bbfdcf469f8cb095aff8165a3abe42;hb=16d109024847af92482237e43f99b82fd997451a;hp=76641019721fd56fa8a639f7d6468a280012c2f2;hpb=7091ed4ecff294623230f96ed93f9a5689ea5938;p=jalview.git diff --git a/help/html/colourSchemes/index.html b/help/html/colourSchemes/index.html index 7664101..51d0738 100755 --- a/help/html/colourSchemes/index.html +++ b/help/html/colourSchemes/index.html @@ -35,18 +35,18 @@ td {

Colour schemes

-

Jalview allows the user to set a background colour for the +

Jalview allows the user to set a colour scheme for the whole alignment view or for each group defined on regions within it.

-

To change the background colour, simply select the colour from +

To change the colour for a view, simply select a new colour scheme from the "Colour" menu.

To change the colour of a group, right click on any residue within a group and use the popup menu to define the group colour.

-

At the top of the "Colour" menu the tick box - "Apply Background Colour to all groups". This is ticked by +

At the top of the "Colour" menu you'll see a tick box + "Apply Colour to all groups". This is ticked by default so that a chosen colour scheme will be applied to all existing groups. If you wish to maintain the colour scheme for - defined groups, make sure you deselect this option before changing - the background colour.

+ defined groups, make sure you deselect this option before selecting + a new scheme in the Colour menu.

The "Colour→Colour Text..."