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+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+
+User Defined Colours
+
+
+
+ User Defined Colours
+
+
+ 
+
+
+ You may define any number of new colour schemes, each with a unique
+ name.
Each of the residues in a colour scheme
+ may be assigned any chosen colour.
Select one or more
+ residues, then select the desired colour.
Use Ctrl-click to
+ select multiple residues, or click then Shift-click to select a
+ block.
Note that the currently selected buttons are
+ highlighted by a lighter text colour.
+
+ The Case Sensitive option allows you to choose
+ distinct colours for upper and lower case residue codes.
+
+ The Colour All Lower Case option allows you to apply a selected colour
+ to all lower case residues.
+
+ Click Apply or OK to set your new
+ colours on the active alignment window.
Click Cancel
+ to undo your changes if you pressed the Apply
+ button.
+
+ If you save your colour scheme with a unique name, the colour scheme
+ name will be added to the
+ Colour menu on each new alignment window.
+
+
Any saved colour schemes will be automatically loaded the
+ next time you use Jalview.
+
+
+