X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fannotation.html;h=7e52c46b822e2320f090d4477bfcf8a8d5bf41be;hb=ebca5f7880f838a5564dd419274ad6025b456dab;hp=b3e09c86e5d888bcf7604dc62dccf1fc403ba408;hpb=ab43013b7e357b84b4abade0dba949668dfb2a0e;p=jalview.git

diff --git a/help/html/features/annotation.html b/help/html/features/annotation.html
index b3e09c8..7e52c46 100755
--- a/help/html/features/annotation.html
+++ b/help/html/features/annotation.html
@@ -1,7 +1,7 @@
 <html>
 <!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -48,6 +48,25 @@ alignment window or loaded from the alignment's file menu.
 			href="../webServices/proteinDisorder.html">disordered region</a>
 		prediction methods. 
 </p>
+<p><strong>Sequence Group Annotation</strong>
+</p>
+<p>
+	If sequence groups are defined, <a href="../calculations/conservation.html">Conservation</a>
+	 and <a href="../calculations/consensus.html">Consensus</a> annotation can be enabled
+	for each group from the <a href="../menus/alwannotation.html">Annotations menu</a>, or can
+	be imported from a Jalview <a href="annotationsFormat.html">Annotations file</a>.
+</p>
+<p><strong>Sequence Selection from Annotation</strong>
+</p>
+<p>
+    Sequences associated with sequence (or sequence group) annotations can be selected by
+    double-clicking the annotation label with these key combinations:
+    <ul>
+    <li>double-click - Select associated sequences (replaces current selection)</li>
+    <li>shift double-click - add  sequences to selection</li>
+    <li>Ctrl (Mac CMD) double-click - toggles inclusion of associated sequences in the current selection</li>
+    </ul>
+    Note this also works in combination with manual sequence selection in the alignment.
 <p><strong>Interactive Alignment Annotation</strong></p>
 <p>
 Annotation rows are added using the <strong>Annotation Label</strong>
@@ -117,7 +136,7 @@ found not to match.
 </li>
 <li>Label<br><em>Set the text label at the selected positions. A
 dialog box will open for you to enter the text.  If
-more that one consecutive position is marked with the same label, only
+more than one consecutive position is marked with the same label, only
 the first position's label will be rendered.</em>
 </li>
 <li>Colour<br><em>Changes the colour of the annotation text label.</em>
