X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2FbioJsonFormat.html;h=f8f87dce2755b68ec68f6d8f4ddc4db84d715f01;hb=92392d967a7cc28241ed079a8bee348fb92c4566;hp=7828f501865d9820f9e0d715def3eacddde3cce0;hpb=d9e40ff0b645ce30767cdfaccd28ef269813ba27;p=jalview.git

diff --git a/help/html/features/bioJsonFormat.html b/help/html/features/bioJsonFormat.html
index 7828f50..f8f87dc 100644
--- a/help/html/features/bioJsonFormat.html
+++ b/help/html/features/bioJsonFormat.html
@@ -29,22 +29,40 @@
   <p>BioJSON is a JavaScript Object Notation (JSON) specification
     for the representation and exchange of multiple sequence alignment
     data.</p>
-  <p>Jalview 2.9 includes support for reading and writing BioJSON
-    v1.0 data directly, or embedded in HTML documents. It can also
-    generate HTML pages which employ the <a href="biojsmsa.html">BioJS MSA viewer</a> for
-    interactive display of BioJSON data.</p>
+  <p>
+    Jalview 2.9 includes support for reading and writing BioJSON v1.0
+    data directly, or embedded in HTML documents. It can also generate
+    HTML pages which employ the <a href="biojsmsa.html">BioJS MSA
+      viewer</a> for interactive display of BioJSON data.
+  </p>
   <p>
     <strong>Finding out more about BioJSON</strong>
   </p>
   <p>
     The BioJSON specification is published at <a
-      href="http://jalview.github.io/biojson/">http://jalview.github.io/biojson/</a>.
+      href="http://jalview.github.io/biojson/"
+    >http://jalview.github.io/biojson/</a>.
+  </p>
+  <p>
+    <em>Import of BioJSON data from HTML pages</em>
   </p>
+  <p>When importing embedded data in an HTML document, Jalview
+    searches for a hidden (usually) input or div element named
+    "seqData":</p>
+  <pre>
+    <code>&lt;div name="seqData" id="seqData" style="display: none;"&gt;#valid BioJSON data#&lt;/div&gt;</code>
+  </pre>
+  <strong>OR</strong>
+  <pre>
+    <code>&lt;input type="hidden" id="seqData" name="seqData" value='#valid BioJSON data#'/&gt;</code>
+  </pre>
+  <p>Jalview can also import BioJSON data directly.</p>
+
   <p>
     <strong>Jalview's Support for BioJSON v1.0</strong>
   </p>
-  <p>BioJSON exports of an alignment view include
-    the following additional data:</p>
+  <p>BioJSON exports of an alignment view include the following
+    additional data:</p>
   <ul>
     <li>Alignment Annotations</li>
     <li>Alignment Features</li>