X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fbiojsmsa.html;h=f3b68162d4a74b5912e0691ba2b3c373b567d9c3;hb=refs%2Fheads%2Freleases%2FRelease_2_10_0_Branch;hp=ff4d8dac4172ce2bde6fe8d11c13ee34620df271;hpb=dfb7b17a2c6b0019320d6fbdddbbd16b933dc62d;p=jalview.git diff --git a/help/html/features/biojsmsa.html b/help/html/features/biojsmsa.html index ff4d8da..f3b6816 100644 --- a/help/html/features/biojsmsa.html +++ b/help/html/features/biojsmsa.html @@ -1,22 +1,48 @@ + BioJS MSA Viewer Export

Exporting Alignments for viewing with the BioJS MSA Viewer

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Since Jalview 2.9, HTML files can be generated from an - alignment within the Jalview desktop application that show the - alignment in an interactive viewer called 'BioJS-MSA'. The BioJS MSA - Viewer is a full-featured JavaScript based multiple sequence - alignment visualisation system created by a community of biological - data visualisation developers, and is developed independently of - Jalview.

+

+ Since Jalview 2.9, HTML files can be generated from an alignment + within the Jalview desktop application that show the alignment in an + interactive viewer called 'BioJS-MSA'. These pages embed Jalview's + alignment data as BioJSON, which + can be imported back into Jalview, and also interpreted by the BioJS + MSA viewer. The BioJS MSA Viewer is a full-featured JavaScript based + multiple sequence alignment visualisation system created by a + community of biological data visualisation developers, and is + developed independently of Jalview. +

To find out more about the BioJS MSA Viewer, please go to http://msa.biojs.net/. +

+

- Making sure your BioJS MSA exports uses the latest + Making sure your BioJS MSA export uses the latest BioJS MSA Viewer

In order to allow Jalview to export data with the latest