Superposing structures based
on their aligned sequences
-
If several structures are available on the alignment, you may add
+If several structures are available on the alignment, you may add
additional structures to an existing Chimera view by selecting their entry
in the appropriate pop-up menu. Jalview will ask you if you wish to add
the structure to the existing alignment, and if you do, it will import
@@ -63,13 +63,14 @@ menu bar of the structure view window to superpose the structures using
the updated alignment.
Chimera Controls
-
The structure is by default rendered as a ribbon diagram. Moving the +The structure is by default rendered as a ribbon diagram. Moving the mouse over the structure brings up tooltips giving the residue name, PDB residue number and chain code ([RES]Num:Chain). Moving the mouse over an associated residue in an alignment window highlights the associated -atoms in the displayed structures. For comprehensive details of Chimera's commands, refer to the tool's Help menu.
-Basic screen operations (see Chimera help for full details). +atoms in the displayed structures. For comprehensive details of Chimera's commands, refer to the tool's Help menu. +
Basic screen operations (see Chimera help +(http://www.cgl.ucsf.edu/chimera/current/docs/UsersGuide/mouse.html) for full details).
| Action | @@ -133,6 +134,8 @@ atoms in the displayed structures. For comprehensive details of Chimera's comman they are insertions (relative to the associated sequence in the alignment) and grey if they are N or C terminal flanks outside the region mapped to the alignment window's sequence. +