X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fchimera.html;h=11b43c87b7879afd0709f6559b28222df9d00cc7;hb=882adcab8cf6f9c72a7e946223f817878c5ee444;hp=dbaad73c115158bf61c6298cb07a2af26beda3aa;hpb=2273eba5668e5340354da60fed329c6c716cc439;p=jalview.git diff --git a/help/html/features/chimera.html b/help/html/features/chimera.html index dbaad73..11b43c8 100644 --- a/help/html/features/chimera.html +++ b/help/html/features/chimera.html @@ -1,7 +1,7 @@

Superposing structures based on their aligned sequences
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If several structures are available on the alignment, you may add +If several structures are available on the alignment, you may add additional structures to an existing Chimera view by selecting their entry in the appropriate pop-up menu. Jalview will ask you if you wish to add the structure to the existing alignment, and if you do, it will import @@ -63,12 +63,12 @@ menu bar of the structure view window to superpose the structures using the updated alignment.

Chimera Controls
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The structure is by default rendered as a ribbon diagram. Moving the +The structure is by default rendered as a ribbon diagram. Moving the mouse over the structure brings up tooltips giving the residue name, PDB residue number and chain code ([RES]Num:Chain). Moving the mouse over an associated residue in an alignment window highlights the associated -atoms in the displayed structures. For comprehensive details of Chimera's commands, refer to the tool's Help menu.

+atoms in the displayed structures. For comprehensive details of Chimera's commands, refer to the tool's Help menu.

Basic screen operations (see Chimera help (http://www.cgl.ucsf.edu/chimera/current/docs/UsersGuide/mouse.html) for full details).