X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fclarguments.html;h=2a040fe31f478a9c53c340d2a2c5e2c88c121745;hb=2273eba5668e5340354da60fed329c6c716cc439;hp=fe5c8016aaa4e01373e1c6940821794a5793681d;hpb=865a855a4ca87eadb3e5ff284ed32ed307d9c34b;p=jalview.git diff --git a/help/html/features/clarguments.html b/help/html/features/clarguments.html index fe5c801..2a040fe 100644 --- a/help/html/features/clarguments.html +++ b/help/html/features/clarguments.html @@ -1,22 +1,24 @@ + --> Jalview Command Line Arguments @@ -51,7 +53,7 @@ Set the colourscheme for the alignment. This can be any of the built-in colourschemes, a name of a predefined colourscheme - (defined in the jalview properties file), or an 'inline' colourscheme + (defined in the Jalview properties file), or an 'inline' colourscheme (see the applet's colour parameter for more information). @@ -124,6 +126,13 @@ arguments have been processed + + +
-jabaws URL
+ +
Specify the URL of the preferred JABAWS server
+ +
-vdoc VAMSAS DOCUMENT FILE/URL
@@ -192,6 +201,10 @@
-eps FILE
Create EPS file FILE from alignment.
+ +
-svg FILE
+
Create Scalable Vector Graphics file FILE from alignment.
+