X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fclarguments.html;h=e06549431f860bd297bdc60940a8ecf2dadcc64a;hb=0bee8aadc22e41e4793db251a7d37a839bd77db8;hp=63a14af6c91f54089dc638f32c30b034a3f596bd;hpb=c17661b22323a66090ea91e04751aa17461b17c5;p=jalview.git

diff --git a/help/html/features/clarguments.html b/help/html/features/clarguments.html
index 63a14af..e065494 100644
--- a/help/html/features/clarguments.html
+++ b/help/html/features/clarguments.html
@@ -67,8 +67,8 @@
         <div align="center">-annotations FILE/URL</div>
       </td>
       <td>Add precalculated annotations to the alignment. See <a
-        href="annotationsFormat.html" target="NEW"
-      >Annotation File</a> description.
+        href="annotationsFormat.html" target="NEW">Annotation
+          File</a> description.
       </td>
     </tr>
     <tr>
@@ -96,6 +96,17 @@
     </tr>
     <tr>
       <td>
+        <div align="center">-nonews</div>
+      <td>
+        <div align="left">
+          Disable check for <a href="../webServices/newsreader.html">Jalview
+            news</a> on startup (not recommended other than for classroom /
+          demo usage)
+        </div>
+      </td>
+    </tr>
+    <tr>
+      <td>
         <div align="center">-nousagestats</div>
       <td>
         <div align="left">Turn off google analytics usage tracking</div>
@@ -247,6 +258,14 @@
       <td><div align="left">Create Scalable Vector Graphics
           file FILE from alignment.</div></td>
     </tr>
+    <tr>
+      <td><div align="center">-biojsMSA FILE</div></td>
+      <td><div align="left">Write an HTML page to display
+          the alignment with the <a href="biojsmsa.html">
+          BioJS MSAviewer MSA</a>
+          </div>
+      </td>
+    </tr>
   </table>
 </body>
 </html>