X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fclarguments.html;h=e06549431f860bd297bdc60940a8ecf2dadcc64a;hb=b1e2aea95b3839a1a53f809c579666075cd3d348;hp=1d6f62d2588fca8f41a58ac4d029d1ae12f86fc4;hpb=27c7530b396a5dd1addc4ab346ef2823d34fb335;p=jalview.git
diff --git a/help/html/features/clarguments.html b/help/html/features/clarguments.html
index 1d6f62d..e065494 100644
--- a/help/html/features/clarguments.html
+++ b/help/html/features/clarguments.html
@@ -67,8 +67,8 @@
-annotations FILE/URL
Add precalculated annotations to the alignment. See Annotation File description.
+ href="annotationsFormat.html" target="NEW">Annotation
+ File description.
|
@@ -98,7 +98,11 @@
-nonews
|
- Disable check for Jalview news on startup (not recommended other than for classroom / demo usage)
+
+ Disable check for Jalview
+ news on startup (not recommended other than for classroom /
+ demo usage)
+
|
@@ -254,6 +258,14 @@
Create Scalable Vector Graphics
file FILE from alignment. |
+
+ -biojsMSA FILE |
+
+ |
+