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+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+
+DAS Features
+
+
+
+
+ DAS Sequence Feature Retrieval
+
+
+ Jalview includes a client for retrieving sequences and their
+ features via the Distributed Annotation System.
+
+
+ - Open the Feature Settings panel by selecting "View
+ -> Feature Settings..."
+ - Click on the "DAS
+ Settings" tabbed pane.
+
+ - Select the sources to use for DAS feature retrieval, then
+ click the "Fetch DAS Features" button.
+
+ - Cancelling Feature Retrieval
Press the Cancel
+ Fetch button to immediately stop feature retrieval. This
+ will not remove any features already added to the alignment,
+ but will halt any outstanding DAS requests.The cancel
+ fetch button is of particular use when one or more DAS
+ annotation servers are not responding!
+
+
+
+
+ If your DAS source selection contains sources which use UniProt
+ accession ids, you will be asked whether Jalview should find UniProt
+ Accession ids for the given sequence names. It is important to
+ realise that many DAS sources only use UniProt accession ids, rather
+ than Swissprot/UniProt sequence names.
The database reference fetcher documentation describes how Jalview
+ discovers what database references are appropriate for the sequences
+ in the alignment.
+
+ - Note
Please remember to save your
+ alignment if either the start/end numbering, or the sequence IDs
+ were updated during the ID retrieval process.
+
+
+
+ DAS support was introduced in Jalview Version 2.1.
+
+
+
+ The DAS registry at http://www.dasregistry.org was decommissioned early in 2015. An unmaintained mirror is currently hosted at http://www.ebi.ac.uk/das-srv/registry/.
+
+
+
+