X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fdassettings.html;h=30b36b14f20875e1db82931dd8d82e3b34d1fa00;hb=57fa882fcd2d85ef524a027fe9883ce8c99649a3;hp=f3e325da16372db9964cd46fa51e92928cca52e1;hpb=e3f4349374e532d0f9bb2bc163ff1783ca030fd6;p=jalview.git diff --git a/help/html/features/dassettings.html b/help/html/features/dassettings.html index f3e325d..30b36b1 100644 --- a/help/html/features/dassettings.html +++ b/help/html/features/dassettings.html @@ -1,32 +1,32 @@ - - -DAS Settings - - -

DAS Settings

-

Jalview can retrieve and visualize features from many DAS - sources at once. The DAS sources are discovered and selected via the DAS settings panel.

-

-

The available sources are listed in the table using each source's -Nickname as its identifier. Clicking on a source's entry in the table -reveals more information about that service in the panel to the -right. Select the tickbox in the "Use Source" column for a -source to add it to the set Jalview queries for alignment and sequence -features. -

-

You can filter the visible DAS sources by authority, type and "label". - You should read the DAS documentation to understand more about these values. -

Updating the list of sources

-

When the DAS Settings panel is first opened, and when the 'Refresh - source' buton is pressed, a list of DAS sources - is retrieved from the DAS registry URL (set by default to the DAS - registration server at - http://das.sanger.ac.uk/registry/das1/sources/).

-

Adding your own DAS Sources

-

You can add your own DAS source to the list by clicking the "Add Local - Source" button. Enter the URL and nickname of your additional service. - It should be noted that Jalview 2.1 will not query additional sources for more - information, but this will be implemented in future editions. -

  - - + + +DAS Settings + + +

DAS Settings

+

Jalview can retrieve and visualize features from many DAS + sources at once. The DAS sources are discovered and selected via the DAS settings panel.

+

+

The available sources are listed in the table using each source's +Nickname as its identifier. Clicking on a source's entry in the table +reveals more information about that service in the panel to the +right. Select the tickbox in the "Use Source" column for a +source to add it to the set Jalview queries for alignment and sequence +features. +

+

You can filter the visible DAS sources by authority, type and "label". + You should read the DAS documentation to understand more about these values. +

Updating the list of sources

+

When the DAS Settings panel is first opened, and when the 'Refresh + source' buton is pressed, a list of DAS sources + is retrieved from the DAS registry URL (set by default to the DAS + registration server at + http://das.sanger.ac.uk/registry/das1/sources/).

+

Adding your own DAS Sources

+

You can add your own DAS source to the list by clicking the "Add Local + Source" button. Enter the URL and nickname of your additional service. + It should be noted that Jalview 2.1 will not query additional sources for more + information, but this will be implemented in future editions. +

  + +