X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Ffeaturesettings.html;h=63217ee5f98419a62174b10cad682db1b1e17e17;hb=38d52319e75f1882278928184066da1033aef332;hp=19006e5103159a9459f72c8b37a5a2527cbcb6f5;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git
diff --git a/help/html/features/featuresettings.html b/help/html/features/featuresettings.html
index 19006e5..63217ee 100755
--- a/help/html/features/featuresettings.html
+++ b/help/html/features/featuresettings.html
@@ -1,21 +1,24 @@
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
Sequence Feature Settings Dialog Box
@@ -36,7 +39,30 @@ they are currently being displayed (only the ticked features and groups
are displayed). You can change the colour or
shading style used for a feature in the associated alignment by clicking
on its colour box.
-Feature settings pop-up menu
+
+ Selecting
+ alignment columns by feature
Double-clicking
+ a feature type in the Feature
+ Settings dialog allows you to select columns in the
+ alignment that contain (or do not contain) features of that type. If a
+ region of the alignment is currently selected, then only features in
+ the current selection will be searched. The following keys affect the
+ way in which selections are made:
+ - Hold down Alt to select columns not
+ containing features of a particular type.
+
+ - Hold down Shift to add columns to the
+ current selection.
+
+ - Press Command/Windows key to toggle column
+ selection state (XOR)
+
+
+ Options are also provided in the feature's pop-up menu (see below).
+
+ Select columns by feature was added in Jalview 2.8.1
+
+ Feature settings pop-up menu
Right-click on a feature to open a pop-up menu that
allows you to sort the alignment or current selection using that feature
type (see below), or toggle the type of colouring used for the feature.