X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Ffeaturesettings.html;h=c433e1f7a429c8cd4e8ffb97e66d85cce4b0729c;hb=496a78f25054b4003f6115c7194a2a466c44197f;hp=d0a9ab76842fd2f94e21c1b1b6c86e04f05cef7a;hpb=a8f483d04205bb8273ee311c12968b7e86d205fa;p=jalview.git diff --git a/help/html/features/featuresettings.html b/help/html/features/featuresettings.html index d0a9ab7..c433e1f 100755 --- a/help/html/features/featuresettings.html +++ b/help/html/features/featuresettings.html @@ -1,22 +1,24 @@ + --> Sequence Feature Settings Dialog Box @@ -74,8 +76,8 @@ alignment based on the average score or total number of currently active features and groups on each sequence. To order the alignment using a specific feature type, use the sort by .. entries in the pop-up menu for that type.
-Feature sorting and graduated feature colouring was introduced -in jalview 2.5

+Feature sorting and graduated feature colouring were introduced +in Jalview 2.5

Transparency and Feature Ordering

It is important to realise that sequence features are often not @@ -83,7 +85,7 @@ distinct and often overlap (for example, a metal binding site feature may be attached to one position along a stretch of sequence marked with a secondary structure feature).

The ordering of the sequence features in the dialog box list is -the order used by jalview for rendering sequence features. A feature at +the order used by Jalview for rendering sequence features. A feature at the bottom of the list is rendered below a feature higher up in the list.
You can change the order of a feature by