X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2FmultipleViews.html;h=250645603709b77dd01b44c6c690e5b058a9e9ac;hb=82bb69383ab22735cbd3440c670ae0b290fe6afd;hp=1391a58669491c1956cd1472a81f916630a36059;hpb=b7f6daa7713a06ec6247ebcf9e9a9af32cd74c4f;p=jalview.git diff --git a/help/html/features/multipleViews.html b/help/html/features/multipleViews.html index 1391a58..2506456 100644 --- a/help/html/features/multipleViews.html +++ b/help/html/features/multipleViews.html @@ -1,13 +1,33 @@ + Multiple Alignment Views -

Multiple Alignment Views

-

Multiple alignment views allows the same alignment to be viewed +

Multiple Alignment Views

+

Multiple alignment views allow the same alignment to be viewed independently in many different ways simultaneously. Each view is an independent visualization of the same alignment, so each may have a -different ordering, colouring, row and column hiding and seuqence +different ordering, colouring, row and column hiding and sequence feature and annotation display setting, but alignment, feature and annotation edits are common to all, since this affects the underlying data.

@@ -16,6 +36,7 @@ View"
menu item, or by pressing Control+T. A newl created view will be identical to the view it was created from, but any changes to the way the alignment is coloured or displayed will only affect the new view.

+

A particular view may focus on some specific aspect of an alignment - for example, hiding all but the region of an alignment containing a particular domain. Right-clicking a view's @@ -26,8 +47,8 @@ something more meaningful.

as tabs within a single alignment window. They can be viewed simultanously by pressing X (or via "View→Expand") to expand each view into its own linked alignment window. Expanded views -are gathered back into into a single tabbed alignment window by pressing -G, or by selecting "View→Gather"). +are gathered back into a single tabbed alignment window by pressing +G, or by selecting "View→Gather".

Hidden Sequence Representatives and Multiple Views

@@ -46,10 +67,10 @@ to any or all other views.

calculation on a particular view may also be associated with other views, using the PCA Viewer's "View→Associate Nodes" submenu.

-

Currently, a PDB Structure Viewer -opened on a structure associated with a sequence in a particular view -will only be associated with the seuqence as displayed in that view.
-This will be resolved in a future release