X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Foverview.html;h=6401fdd735bc949e76b650df99c1c1884551d440;hb=34ae1e91770fcaa071595ae302f23351e0bcb0ae;hp=4f265926f788cda8ca2dcebf5d4b7c16753dd05b;hpb=140b0d3f1d7a31d14cb02deb55214bbad44874be;p=jalview.git diff --git a/help/html/features/overview.html b/help/html/features/overview.html index 4f26592..6401fdd 100755 --- a/help/html/features/overview.html +++ b/help/html/features/overview.html @@ -27,18 +27,30 @@ View→Overview window
Select the overview window menu item to get a navigable image - of the whole alignment.
+ of the whole alignment. By default, gaps are shown as dark grey, in + the overview (since 2.10.2b1).The red box indicates the currently viewed region of the alignment, this may be moved by clicking and dragging with the mouse.
-Right-click (or CMD-Click) to open the
- overview's popup menu. This provides an option to include hidden
- regions in the overview (shown as dark-grey rows and columns).
+
Click anywhere else in the overview to centre the view on that + position
+ ++ Hiding hidden regions in the overview +
+
+ Hidden sequences and columns are by default shown as dark-grey rows
+ and columns in the overview. Hidden regions can also be omitted
+ entirely (to make the Overview 'WYSIWIG') by Right-clicking
+ (or CMD-Clicking) to open the overview's popup menu.
The option to include/exclude hidden regions in the
- overview was introduced in Jalview 2.10.2.
+ overview was introduced in Jalview 2.10.2.
+
-
+
+ Previous to 2.10.2b1, gaps were white, and sequences shown as + dark grey unless coloured.