X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fseqmappings.html;h=202a5dfb83887c5f25d374d6072af4a5a2429afc;hb=d79235eeb9913fa59f5f4e635a2a8c39d80c775b;hp=46fcd5956fe6d6787c2df144f098c0c66ee689b5;hpb=7fd5a3b7a544114fa9e867fb4088a4b0b1ee9871;p=jalview.git diff --git a/help/html/features/seqmappings.html b/help/html/features/seqmappings.html index 46fcd59..202a5df 100644 --- a/help/html/features/seqmappings.html +++ b/help/html/features/seqmappings.html @@ -1,22 +1,42 @@ - -Mapping Between Different Sequences - + + +Mapping Between Different Sequences + -

Mapping Between Different Sequences

-

A new feature in Jalview 2.8 is the ability to map -between sequences in different domains, based on alignment, -or by the use of explicit mappings provided by databases. -

-

The most familiar mapping is the one used to identify -the coordinates corresponding to a displayed sequence when -viewing a PDB file associated with a sequence (see -"Viewing PDB Files" -for more information.

-

The newest form of mapping supported by Jalview is the -correspondence between DNA and protein sequences. This mapping -can be imported directly from EMBL and EMBLCDS database records -retrieved by the Sequence Fetcher, -or by the definition of coding regions. +

Mapping Between Different Sequences

+

A new feature in Jalview 2.3 is the ability to map between sequences in different + domains, based on alignment, or by the use of explicit mappings provided by + databases.

+

The most familiar mapping is the one used to identify +the coordinates corresponding to a displayed sequence when +viewing a PDB file associated with a sequence (see +"Viewing PDB Files" +for more information.

+

The newest form of mapping supported by Jalview is the +correspondence between DNA and protein sequences. This mapping +can be imported directly from EMBL and EMBLCDS database records +retrieved by the Sequence Fetcher, +and allows sequence features to be mapped directly from Uniprot +das sources to their coding region on EMBL sequence records. - \ No newline at end of file +